Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIKRTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMIWPFQYNISLKTKDSNVDLINYLPKNKIDSADVSQKLGYNIGGNFQSAPSIGGSGSFNYSKTISYNQKNYVTEVESQNSKGVKWGVKANSFVTPNGQVSAYDQYLF-AQDPTGPAARDYFVPDNQLPPLIQSGFNPSFITTLSHERGKGDKSEFEITYGRNMDATY-----AYVTRHRLAVDRKHDAFKNRNVTVKYEVNWKTHEVKIKSITPK |
4IYC Chain:A ((10-289)) | ------------------------------NNIENIGDGAEVVKRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKNTDHIKAMRWPFQYNIGLKTNDPNVDLINYLPKNKIDSVNVSQTLGYNIGGNFNSGP---GNGSFNYSKTISYNQQNYISEVEHQNSKSVQWGIKANSFITSLGKMSGHDPNLFVGYKPYSQNPRDYFVPDNELPPLVHSGFNPSFIATVSHEKGSGDTSEFEITYGRNMDVTHATRRT---GNSYLEGSRIHNAFVNRNYTVKYEVNWKTHEIKVK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45533 for 2109 contacts (-21.6/contact) +
2D Compatibility (PS) -28666 + (NN) -11530 + (LL) 3424
1D Compatibility (HY) -26800 + (ID) 9300
Total energy: -118405.0 ( -56.14 by residue)
QMean score : 0.393
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