Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFYEFMQSFLGDDTPLG-ELVDWINQDSNFPREVKSHSEILSYFRTNPCPESISVPVIKRALSVFNQFTNVQ
4Z25 Chain:A ((540-570))
--WHYFVPTLVGDDTPAGREFADTLSKLSYYPR----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4Z25.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3964 for 137 contacts (-28.9/contact) +
2D Compatibility (PS) -2966 + (NN) -120 + (LL) 2992
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -6258.0 ( -45.68 by residue)
QMean score : 0.279
(partial model without unconserved sides chains):
PDB file :
Tito_4Z25.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Z25-query.scw
PDB file :
Tito_Scwrl_4Z25.pdb
: