Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAAKDII--TDEDKKKIGMVIVATESAVDAAKAAAVQIHNLL---------GIQPFARCFEMKEACYAATPAIQLAKDYL--ATRPNEKVLVIATDTARYGLNSGGEPTQGAGAVAMVIAHNPSILALNEDAVAYTEDVYDFWRPT-GHKYPLVDGALSKDAYIRSFQQSWNEYAKR---QGK--------SLADFASLCFHVPFTKMGKKALESIIDN----ADETTQERLRSGYE-------------------------DAVD--------YNRYVGNIYTGSLYLSLISLLENRDLQ--AGETIGLFSYGSGSVGEFYSATLVEGYKDHLDQAAHKALLNNRTEVSVDAYETFFKRFDDVEFDEEQDAVHEDRHIFYLSNIENNVREYHRPE |
| 2WYA Chain:A ((6-374)) | --VGILALEVYFPAQYVDQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGI-------DTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAVYP-SGNARPTGGAGAVAMLIGPKAPLALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTLDDLQYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLYLSTHNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFS------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170488 for 2562 contacts (-66.5/contact) +
2D Compatibility (PS) -32549 + (NN) -12154 + (LL) 6284
1D Compatibility (HY) -23600 + (ID) 5500
Total energy: -238007.0 ( -92.90 by residue)
QMean score : 0.520
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