Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKEKMLAEKWYDANFDQDLINERARAKDICFELNHTKPSDTNKRKELIDQLFQTTTDNVSISIPFDTDYGWNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFYHRNEGYEKAGPIHIGSNTWFGGHVAVLPGVTIGEGSVIGAGSVVTKDIPPHSLAVGNPCKVVRKIDNDLPSETLNDETIK
4ISX Chain:A ((5-187))
-TEKEKMLSGKGYYAN-DELLVKEREYCKKLTRLFNNTLEDEYEKREDILRQLFGSVGKQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGDNVVIGAGSVVTKDIPPNTVAVGNPCRVIKKIE--------------
General information:
TITO was launched using:
RESULT:
Template:
4ISX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97712 for 1421 contacts (-68.8/contact) +
2D Compatibility (PS) -20456 + (NN) -13651 + (LL) 792
1D Compatibility (HY) -18000 + (ID) 4300
Total energy: -153327.0 ( -107.90 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_4ISX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ISX-query.scw
PDB file :
Tito_Scwrl_4ISX.pdb
: