Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLENVF--VKKGNKNI--LDGCNFNFEKGKSYALVGESGAGKSTLLNIIAGFEDVSQGSIYIE---------DKLLKKKVDFYRYTLGYLFQNFALLENQTISQNLDLALKFKKNKKDNMNLKK----EVLKKVGLDLDIK-RIVSSLSGGEQQRVALARLILKDPKIILADEPTGSLDTKNGKIVIDLLLKLLDEN-KTMIVVTHDLELAKRFDVIVNISELRS
1F3O Chain:A ((2-210))
-IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRD----KIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADEPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVAR-------------
General information:
TITO was launched using:
RESULT:
Template:
1F3O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101200 for 1425 contacts (-71.0/contact) +
2D Compatibility (PS) -20779 + (NN) -11895 + (LL) 1816
1D Compatibility (HY) -15600 + (ID) 4150
Total energy: -151808.0 ( -106.53 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_1F3O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F3O-query.scw
PDB file :
Tito_Scwrl_1F3O.pdb
: