Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATRTQARGAVVELLYAFE-SGNEEIKKIASSMLEE---KKIKNNQLAFALSLFNGVLEKINEIDALIEPHLKDWDFKRLGSMEKAILRLGAYEIGF---TPTQNPIIINECIELGKLYAEPNTPKFLNAILDSLSKKLAQKPLI
1TZW Chain:A ((5-137))
---RRRMRLAVFKALFQHEFRRDEDLEQILEEILDETYDKKAKED----ARRYIRGIKENLSMIDDLISRYLEKWSLNRLSVVDRNVLRLATYELLFEKDIPIE--VTIDEAIEIAKRYGTENSGKFVNGILDRIAKEHAPKEKF
General information:
TITO was launched using:
RESULT:
Template:
1TZW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86158 for 929 contacts (-92.7/contact) +
2D Compatibility (PS) -13378 + (NN) -7305 + (LL) 756
1D Compatibility (HY) -10800 + (ID) 2350
Total energy: -119235.0 ( -128.35 by residue)
QMean score : 0.731
(partial model without unconserved sides chains):
PDB file :
Tito_1TZW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TZW-query.scw
PDB file :
Tito_Scwrl_1TZW.pdb
: