Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTSNTKTPKPVLIAGPCVIESLENLRSIAIKLQPLANN-ERLDFYFKASFDKANRTSLESYRGPGLEKGLEMLQTIKDEFGYKILTDVHESYQASVAAKVADILQIPAFLCRQTDLIVEVSQTNAIVNIKKGQFMNPKDMQYSVLKALKTRDSSIQSPTYETALKNGVWLCERGSSFGYGNLVVDMRSLKIMREFAPVIFDATHSVQMPGGANGKSSGDSSFPPILPRAAAAVGIDGLFAETHIDPKNALSDGANMLKPDELEHLVTDMLKIQNLF |
1FXP Chain:A ((3-256)) | ---------KFLVIAGPCAIESEELLLKVGEEIKRLSEKFKEVEFVFKSSFDKANRSSIHSFRGHGLEYGVKALRKVKEEFGLKITTDIHESWQAEPVAEVADIIQIPAFLCRQTDLLLAAAKTGRAVNVKKGQFLAPWDTK-NVVEKLKFGGA------------KEIYLTERGTTFGYNNLVVDFRSLPIMKQWAKVIYDATHSVQLP----------REFIFPLIRAAVAVGCDGVFMETHPEPEKALSDASTQLPLSQLEGIIEAILEIREVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133610 for 2109 contacts (-63.4/contact) +
2D Compatibility (PS) -26387 + (NN) -10864 + (LL) 456
1D Compatibility (HY) -24800 + (ID) 6300
Total energy: -201505.0 ( -95.55 by residue)
QMean score : 0.581
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