Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKFLFKQKFCESLPKSFSKTLLALSLGLILLGVFIPFPKVPKHQSVPLALHFTEHYARFIPTILSVAIPLIQRDAVGLFQVANASIATTFLTHATKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSVK-----------------------KY---LWLLPLIPLTMLARIYLDMHTIGAVLAGLGTGMLCVGLFTSPKNLN
1UP8 Chain:A ((479-576))--------------------------------------------------------------------------------------------------------------------FHPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESLLLGEQVAIGILEEQSLT


General information:
TITO was launched using:
RESULT:

Template: 1UP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50871 for 446 contacts (-114.1/contact) +
2D Compatibility (PS) -7571 + (NN) -4162 + (LL) 9232
1D Compatibility (HY) 400 + (ID) 600
Total energy: -53572.0 ( -120.12 by residue)
QMean score : 0.152

(partial model without unconserved sides chains):
PDB file : Tito_1UP8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UP8-query.scw
PDB file : Tito_Scwrl_1UP8.pdb: