Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMFHKALITFIVLWFFLNGLGAYDFKHCQAFFKKASLQKGGVALKELPKGVYLYYSKTYPKHAKVIKSDPFIGLYLLQSAPSEYVYTLRDLDKDAL--------IRPMASIGANQATEARLLVGQKGYDRYAQIS---QKTQKNGVISNICYQMLGLGV------GGN---GF-IETKFIKRFLNQQEPY----YGDIGVRLEERHKRL-----VVAQFDPF----FPKNPFLK-----NDEILAINDYKIHSLAEFEWVVSNLSYQSLAKVKIKRNHQIKEVTLKVNKRYGGFLLKDTFLERYGIALDERFIITKIGAHLPKGLDFLKLGDRILWVNHKSVSFNPKALREALSTPKIELLVWRQGFEFYIKVR |
| 3MH4 Chain:A ((124-353)) | -------------------------------------------------------------DAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRS---NFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLE---------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13543 for 1185 contacts (-11.4/contact) +
2D Compatibility (PS) -18720 + (NN) 3542 + (LL) 11400
1D Compatibility (HY) -5600 + (ID) 2350
Total energy: -25271.0 ( -21.33 by residue)
QMean score : 0.214
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