Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHDAYEIILSWFITPLTAILGRFAEFFLYTLHAQLVFNSAVALAFMLFAYRSL---KEQNFFSASALLEALWFVGFFALFNYALKNPSRFYELFQNAIFIAPNMITQSLSQSLSNFSNHALSLDFIFNHGFYALSFISDLSHNEMSVWLFLSILQALFLSVLFAIIILVYLEAHVWCSLGALFLAFGFFKTWRSVVVICLKKCFALGFYKPFLLLVGFLNVSVTKALMDASMQEKQDLSLLLVVALFLCCVFIIGVPFFINALFRVQNSLKETYKLATNLSANLTQSAFQSLQHATTSPAPSHISSSASQSVSKEKETHSPTFKVETTQLDVKIPNFKQKKVKKDTIDTKNEI |
| 3PD0 Chain:A ((185-247)) | ----------SWFIQSLCAMLKQYADKLEF-MHILTRVNRKVATAFESFSFDATFHAKKQIPCIVSMLTKELYFYHH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -39073 for 324 contacts (-120.6/contact) +
2D Compatibility (PS) -5750 + (NN) 4459 + (LL) 24720
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -20694.0 ( -63.87 by residue)
QMean score : 0.128
|
|
|