Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKVLYALMGFLLVFSALKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNIDYFQGQTYKIRLRYAMATLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDSEGKIFSFYVFSTTFTSSKHPNLQVFIEDKNYYTNAFIKPQKENQENMSENAPKDAQKNNKPLKEEKEETKEKEEETIIIGDNTNAMKIIKKDIQKGYKALKSSQRKWYCLWACSKKSKLSLMPKEIFNDKQFTYFKFDKRLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSTKWTLRLGKDYLCIRFVKRRKGE |
| 3E7J Chain:A ((587-668)) | --------------------------------------------------------------------------------------------------------------------LPDAANSNITSIGGKGK--DFWVFGTNYTNDPKPGTDEALERGEWRVE--ITPKKAAAEDYYLNVIQIADNTQQKLHEVKRIDGDKVVGVQLADRIVTFSKTSETVDRPFGFSVVGKGTFKFVMTDLLPGTWQVLKDGKILYPALSAKGDDGALYFEGTEGTYRFLR--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 20991 for 336 contacts (62.5/contact) +
2D Compatibility (PS) -8101 + (NN) 2900 + (LL) 12464
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: 24654.0 ( 73.38 by residue)
QMean score : 0.196
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