Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEKIALITGVTGQDGSYLAEYLLNLGYEVHGLKRRSSSINTSRIDHLYEDLHSEHKRRFFLHYGDMTDSSNLIHLIATTKPTEIYNLAAQSHVKVSFETPEYTANADGIGTLRILEAMRILGLE--KKTRFYQASTSELYGEVLETPQNENTPFNPRSPYAVAKMYAFYITKNYREAYNLFAVNGILFNHESRVRGETFVTRKITRAASAIAYNLTDCLYLGNLDAKRDWGHAKDYVKMMHLMLQAPTPQDYVIATGKTTSVRDFVKMSFEFIGIDLEFQNTGIKEIGLIKSVDEKRANALQLNLSHLKTGKIVVRIDEHYFRPTEVDLLLGDPTGAEKELGWVREYDLKELVKDMLEYDLKECQKNLYLQDGGYTLRNFYE |
1N7H Chain:A ((29-366)) | ---KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIY--------ALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNW----------------------------------KDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKREKVLVDAGY------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N7H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134711 for 2906 contacts (-46.4/contact) +
2D Compatibility (PS) -34855 + (NN) -14307 + (LL) 3832
1D Compatibility (HY) -32000 + (ID) 9100
Total energy: -221141.0 ( -76.10 by residue)
QMean score : 0.424
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