Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRMLAEFEKIQAILMAFPHEFGDWAYCIEEARESFLHIIQTIAKHAKVLVCVHTNDTIGYETLKNLP-GVEIARIDTNDTWARDFGA-------ISVENHGVLECLDFGFNGWGLKYP---SNLDNQVNFKLKHLGFLKHPLKTMPYILEGGSIESDGAGSILTNTQCLLEKNRNPHLNQNGIETMLKKELGAKQVLWYSYGYLKGDDTDSHTDTLARFLNKDTIVYSACEDENDEHYTALKKMQEELKTFKKLDGTPYKLIPLEIPKAVYNENQQ-----------------RLPATYVNFLLCNNALIVPTYNDP-NDTLILETLRQHTP-LEVIGVD-CNTLIKQHGSLHCVTMQLY |
3H7C Chain:X ((17-370)) | -----AEWDSHAQTWIGWPERQDNWRHNALPAQRVFAGVAKAISKFEPVTVCA--SPAQWENARKQLPEDIRVVEMSMNDSWFRDSGPTFIVRKR----NRNIA-GIDWNFNAWGGANDGCYNDWSHDLLVSRKILALERIPRFQHSMILEGGSIHVDGEGTCLVTEECLLNKNRNPHMSKEQIEEELKKYLGVQSFIWLPRGLYGDEDTNGHIDNMCCFARPGVVLLSWTDDETDPQYERSVEALSVLSNSIDARGRKIQVIKLYIPEPLYMTEEESSGITQDGEAIPRLAGTRLAASYVNFYIANGGIIAPQFGDPIRDKEAIRVLSDTFPHHSVVGIENAREIVLAGGNIHCITQQQP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H7C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200134 for 2779 contacts (-72.0/contact) +
2D Compatibility (PS) -34888 + (NN) -18353 + (LL) 1428
1D Compatibility (HY) -16400 + (ID) 4850
Total energy: -273197.0 ( -98.31 by residue)
QMean score : 0.535
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