Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIQIHHANAFEIIKDFHQQNLKVDAIITDPPYNISVKNNFSTLKSAKRQGIDFGEWDKNFKLLEWIARYASLINPNGCMVIFCSYRF---------ISYIADFLEENGFVVKDFIQWVKNNPMPRNIHRRYVQDTEFALWAVKKKAKWVFN-----KPKNEK----YLRPLILKSPVV-----------------SGIERVKHPTQKSLTLMEKIISTHTNPNDTVLDPFMGSGTTGLACKNLKRNFIGIESE---KEYFQIAQKRLS |
1NW8 Chain:A ((59-281)) | ----------------------VQLIICDPPYNI--------MPADWDDHMDYIGWAK-----RWLAEAERVLSPTGSIAIFGGLQYQGEAGSGDLISIISHMRQNSKMLLANLIIW--NYPNGMSAQRFFANRHEEIAWFAKTK-KYFFDLDAVREPYDEETKAAYMKDKRLNPESVEKGRNPTNVWRMSRLNGNSLERVGHPTQKPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78018 for 1268 contacts (-61.5/contact) +
2D Compatibility (PS) -19455 + (NN) -5429 + (LL) 3332
1D Compatibility (HY) -11200 + (ID) 3150
Total energy: -113920.0 ( -89.84 by residue)
QMean score : 0.439
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