Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVQMDTEEVREFVGHLERFKELLNEEVNSLNGHFHNLES-WQDARRDKFSEVLDNLKGTFNEFNEAAQEQIAWLKERIRVLEEDY
4J11 Chain:A ((4-72))
MAEIKITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKF-------RGEFIQSKQAMQQYIPILEGISTDLKRIA
General information:
TITO was launched using:
RESULT:
Template:
4J11.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1992 for 322 contacts (-6.2/contact) +
2D Compatibility (PS) -7021 + (NN) -2515 + (LL) 464
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -16414.0 ( -50.98 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_4J11.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J11-query.scw
PDB file :
Tito_Scwrl_4J11.pdb
: