Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRISTETELNWEFVESLNENALSDLEERLEIGFSDAFKDFIKRSNYGFSQLRYFMVGNESYMFKHVLNFNLESLLIDFMQSLKEWLEPEEIVFANDG-YGGYYLWNTTTD-----VVLFLDTDNGSKKVLLNLNMFLKKLESRG
3ZO9 Chain:A ((126-179))
-----------------------------------------------------------------------ITDLVMNHTSDQHEWFQ--ESRHNPDGPYGDFYVWSDTSDRYPDARIIFVDTEESNWTFDPVRRQFYWHRFFSH
General information:
TITO was launched using:
RESULT:
Template:
3ZO9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7962 for 190 contacts (-41.9/contact) +
2D Compatibility (PS) -5148 + (NN) -880 + (LL) 5004
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -12936.0 ( -68.08 by residue)
QMean score : -0.085
(partial model without unconserved sides chains):
PDB file :
Tito_3ZO9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZO9-query.scw
PDB file :
Tito_Scwrl_3ZO9.pdb
: