Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSILAEKLSSILKRYDELTALLSSVEVVSDIKKLTELSKEQSSIEEISVA---SKEYLSVLEGIKENKELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGIFVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQRVPETESQGRIHTSAITVAIMPEVDD-VEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRITHLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANA-----KDRKEQVGSGDRSERIRTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLIAHAQSQFE |
| 1GQE Chain:A ((32-357)) | ------------ERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLE--FRRMFSGE--YDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEV---EMQKKNAEKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVETRNTQAV-LDGSLDQFIEASLKAGL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GQE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 93881 for 2208 contacts (42.5/contact) +
2D Compatibility (PS) -32177 + (NN) -3384 + (LL) 1880
1D Compatibility (HY) 10400 + (ID) 1750
Total energy: 68850.0 ( 31.18 by residue)
QMean score : 0.158
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