Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAIKILLIMTLSLNAISVNRALFDLKDSQLKGELTPKIVDFGGYKSNTTEWGATALNYINAANGDAKKFSALVEKMRFNSGILGNFRAHAHLRQALKLQKNLKYCLKIIARDSFYSYRTGIYIPLGISLKDQKTAQKMLADLSVVGAYLKKQQENEKAQSPYYRSNNYYNSYYSPYYGMYGMYGMGMYGMYGMGMYDFYDFYDGMYGFYPNMFFMMQVQDYLMLENYMYALDQEEILDHDASINQLDTPTDDDRDDKDDKSSQPANLMSFYRDPKFSKDIQTNRLNSALVNLDNSHMLKDNSLFHTKAMPTKSVDAITSQAKELNHLVGQIKEMKQDGASPNKIDSVVNKAMEVRDKLDNNLN---QLDNDLKDQKGLSSEQQAQVDKALDSVQQLSHSSDVVGNYLDGSLKIDGDDRDDLNDAINNPMQQPAQQTPINNMDNTHANDSKDQGGNALINPNNATNDDHNDDHMDTNTTDTSNANDTPTDDKDASGNNTGDMNNTDTGNTDTGNTDTGNTDDMSNMNNGNDDTGNTNDDMGNSNDMGDDMNNANDMNDDMGNSNDDMGDMGDMNDDMGGDMGDMGDMGGDMGN |
| 3TNU Chain:A ((332-382)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TNU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5188 for 178 contacts (29.1/contact) +
2D Compatibility (PS) -5125 + (NN) -1790 + (LL) 18620
1D Compatibility (HY) -2400 + (ID) 600
Total energy: 13893.0 ( 78.05 by residue)
QMean score : 0.588
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