Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKEQEAQEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLNQEQK
3SZP Chain:A ((30-45))
-------------------------------------------ATITRRIQALEDSLNLRLL
General information:
TITO was launched using:
RESULT:
Template:
3SZP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3116 for 54 contacts (57.7/contact) +
2D Compatibility (PS) -1782 + (NN) -763 + (LL) 5408
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 4129.0 ( 76.46 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_3SZP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SZP-query.scw
PDB file :
Tito_Scwrl_3SZP.pdb
: