Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFKVVQICGGLGNQMFQYAFAKSLQKHSNTPVLLDITSFDGSNRKMQLELFPIDLPYASAKEIAIAKMQHLPKLVRDALKYMGFDRVSQEIVFEYEPKLLKPSRLTYFYGYFQDPRYFDAISSLIKQTFTLPPPPENGNNKKKEEEYHRKLSLILAAKNSVFAHIRRGDYVGIGCQLGIDYQKKAVEYMAKR--VPNMELFVFCEDLKFTQNLDLGYPFMDMTTRDKDEEAYWDMLLMQSCKHGIIANSTYSWWAAYLINNPGKIIIGPKHWLFGHENILCKEWVKIESHFEVKSQKYNA |
| 4JL8 Chain:A ((21-103)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------AKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEV-FPKHGNVIFDGFPRTV--KQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44206 for 506 contacts (-87.4/contact) +
2D Compatibility (PS) -8475 + (NN) -2512 + (LL) 10992
1D Compatibility (HY) -3600 + (ID) 1300
Total energy: -49101.0 ( -97.04 by residue)
QMean score : 0.230
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