Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTLFSVYLFLSLNPLFLEAKEITWSQFLENFKNKNEDDKPKPLTIDKNNE------KQQILDKNQQILKRALEKSLKFFFIFGYNYSQAAYSTTNQNLTLTANSIGFNTATGLEHFLRNHPKVGFRIFSVYNYFHSVSLSQPQILMVQNYGGALDFSWIFVDKKTYRFRSYLGIALEQGVLLVDTIKTGSFTTIIPRTKKTFFQAPLRFGFIVDFIGYLSLQLGIEMPLVRNVFYTYNNHQERFKPRFNANLSLIVSF |
4U5K Chain:A ((181-245)) | -----------------IERFEKIWEQIAERFKNKSEN-----LLFEIMNEPFGNITDEQIDDMNSRILKIIRKTNPTRIVIIGGGY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U5K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 159 for 315 contacts (0.5/contact) +
2D Compatibility (PS) -6740 + (NN) -6103 + (LL) 13424
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -3210.0 ( -10.19 by residue)
QMean score : 0.467
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