Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METIEWNEEQRKAFQDLLREFVALIDAKVQE------KKQMGKK-------PKIPKYASCQNGLNKFLA--PWGYACKISLGTGLLSHEPSIAFCRQDILGEGFVNGEKPTPTKGFYLWFAYYWRNDLEKIDLCIGRSDEEDKKEECQKCLAYDKIIPNRNECYREL |
3AJ1 Chain:A ((6-73)) | ---------KKPDFTLFLQTLSWEIDDQVGIEVRNELLREVGRGMGTRIMPPPCQTVDKLQIELNALLALIGWGTVTLELLSEDQSLRIVHENLPQVGSAGEPSGTWLAPVLEGLYGRWVTSQAGAFGDYVVTRDVDAEDLNAVPRQTIIMYMRVRSSAT------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AJ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1163 for 186 contacts (6.3/contact) +
2D Compatibility (PS) -5354 + (NN) -3404 + (LL) 1400
1D Compatibility (HY) -400 + (ID) 350
Total energy: -6945.0 ( -37.34 by residue)
QMean score : 0.417
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