Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDYSELEIFEGNPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEERFESFAKALRMDEELQQKIESRKTDIVIQSMANILSGNE
4OCU Chain:A ((162-187))
------------------------------------------LTETIAHFHDTPHRFEDFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMD
General information:
TITO was launched using:
RESULT:
Template:
4OCU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5438 for 95 contacts (57.2/contact) +
2D Compatibility (PS) -2795 + (NN) -1472 + (LL) 3432
1D Compatibility (HY) -400 + (ID) 650
Total energy: 3553.0 ( 37.40 by residue)
QMean score : 0.190
(partial model without unconserved sides chains):
PDB file :
Tito_4OCU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OCU-query.scw
PDB file :
Tito_Scwrl_4OCU.pdb
: