Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MILEVKDLKTYFFTDKGVNKAVDGVSFGLKKSQTLCIVGESGSGKSITSLSILGLIE--KPGKIVGGSIQFLGQDLLQLKEKQMQKEIRGKKIGMIFQEPMTSLNPSYTVGFQINEVLKIHHPSLNKKERLERVVYEL-ERVGIPHAGDKYHEYPFNLSGGQRQRVMIAMAMVCEPEILIADEPTTALDVTIQAQILELMKELQQKKGTSILFITHDLGVVAQIADEVVVMYKGHVVEQASAKELFADPRHPYTKALLNAIPKPGKEYRKKRLETVDENVDYLSFQKELR |
4U00 Chain:A ((4-241)) | -IIRIRNLHKWF----GPLHVLKGIHLEVAPGEKLVIIGPSGSGKS-TLIRTINRLEDFQEGEVV--------VDGLSVKDDRALREIR-REVGMVFQQ--FNLFPHMTV--LENVTLAPMRVRRWPREKAEKKALELLERVGIL---DQARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQ-GGMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRVLH--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123399 for 1935 contacts (-63.8/contact) +
2D Compatibility (PS) -25974 + (NN) -14034 + (LL) 2056
1D Compatibility (HY) -18800 + (ID) 4400
Total energy: -184551.0 ( -95.38 by residue)
QMean score : 0.484
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