Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAHKERLESNLLELLQEALASLNDSELNSLSVTKVECSKGKHHALVFVLSS--DHKILSKLKKAEGLIRQFVLQASGWFKCPKLSFVLDDSLEKQLRLDAIFNEIAKGKDND
3T0U Chain:A ((347-439))
--------------------AHFSDRAGDPITVKNAVCIHEEDDGLLFKHSDFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEE
General information:
TITO was launched using:
RESULT:
Template:
3T0U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1510 for 433 contacts (-3.5/contact) +
2D Compatibility (PS) -9049 + (NN) 7386 + (LL) 2108
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -7715.0 ( -17.82 by residue)
QMean score : 0.012
(partial model without unconserved sides chains):
PDB file :
Tito_3T0U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T0U-query.scw
PDB file :
Tito_Scwrl_3T0U.pdb
: