Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQEAQKNNPNNPNNPINNQK
2XDA Chain:A ((1-150))
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKA--------------------
General information:
TITO was launched using:
RESULT:
Template:
2XDA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123209 for 1194 contacts (-103.2/contact) +
2D Compatibility (PS) -16804 + (NN) -6919 + (LL) 12
1D Compatibility (HY) -24000 + (ID) 7500
Total energy: -178420.0 ( -149.43 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_2XDA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XDA-query.scw
PDB file :
Tito_Scwrl_2XDA.pdb
: