Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMREILTNRFFPSLFKKRLDFSNRVVLGLGSNLKNPLKILKSCFLYFKNHSKIGKIFSSPIYINPPFGYTNQPNFYNATIILKTSLGLRHFFALVFYIERRFGRARKRDFKDAPRTLDIDIIAFNQVILRQNDLTLPHPKWSERDSVLVPLTLQQILFKREEW
2QX0 Chain:A ((3-130))
-----------------------RVYIALGSNLAMPLQQVSAAREALAHLPRSRLVACSPLYRTKPLGPQDQPDFLNAVVALDTSLPPEQLLDHTQAIERNQGRVRKEQ-RWGPRTLDLDIMLYGDQVIKTDRLTIPHYGLKAREFMLYPLADIAPDLIFPDG
General information:
TITO was launched using:
RESULT:
Template:
2QX0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86980 for 948 contacts (-91.8/contact) +
2D Compatibility (PS) -13693 + (NN) -7607 + (LL) 1960
1D Compatibility (HY) -6800 + (ID) 2250
Total energy: -115370.0 ( -121.70 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_2QX0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QX0-query.scw
PDB file :
Tito_Scwrl_2QX0.pdb
: