Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYKKGYKVGVFDADIGLANLDVIFGVKTHKNILH-ALKGEAKLQEIICEIE-PGLCLIPGD-SGEEILKYISGAEALDRFVDEEGVLSSL----DYIVIDTGAGIGATTQAFLNASDCVVIVTTPDPSAITDAYACIKINSKNKDELFLIANMVAQPKEGRATYERLFKVAKNNIASLELHYLGAIENSSLLKRYVRERKILRKIAPNDLFSQSIDQIASLLVSKLETGTLEIPKEGLKSFFKRLLKYLG |
| 1G3R Chain:A ((3-150)) | ---------------------------RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGVDDPDVTLHDVLAGEANVEDAIYMTQFDNVYVLPGAVDWEHVLK------ADPRKLPE--VIKSLKDKFDFILIDCPAGLQLDAMSAMLSGEEALLVTNPEISCLTDTMKVGIVLKKAGLAILGFVLNRYGRSDRDIPPEAAEDVMEVPLLAVIPEDPAIREGTLEGIPAVKYKPESKGAKAFVKLAEEIEKLA------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G3R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115748 for 1158 contacts (-100.0/contact) +
2D Compatibility (PS) -15705 + (NN) -9191 + (LL) 3376
1D Compatibility (HY) -11600 + (ID) 2650
Total energy: -151518.0 ( -130.84 by residue)
QMean score : 0.577
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