Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNAFKAFALLIVFFSNALLAQDLKIAAAANLTRALKALVKEFQKEHPKDAINISFNSSGKLYAQIAQNAPFDLFISADIARPKKLYDEKIT-PFKEEVYAKGVLVLWSENLKMDSLEILKDPKI-----------KRIAMANPKLAPYGKASMEVLDRLKLTPSLKSKIIYGASISQAHQFIATKNAQIG--FGALSLIDKKDKNLSYFIIDKTLYNPIEQALIITKNGANNPLAKVFKDFLFSPKARAIFKEYGYIVD |
| 2H5Y Chain:A ((29-250)) | ---------------------------AAASLKESMDEAATAYEKAT-GTPVRVSYAASSALARQIEQGAPADVFLSADLEWMDYLQQHGLVLPAQRHNLLGNTLVL----VAPASSKLRVDPRAPGAIAKALGENGRLAVGQTASVPAGKYAAAALRKLGQWDSVSNRLAESESVRAALMLVSRGEAPLGIVYGSDARADAKVRVVATFPDDS--HDAIVYPVAALKN-SNNPATAAFVSWLGSKPAKAIFARRGFSLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99557 for 1871 contacts (-53.2/contact) +
2D Compatibility (PS) -22000 + (NN) -9099 + (LL) 3196
1D Compatibility (HY) -3600 + (ID) 2850
Total energy: -133910.0 ( -71.57 by residue)
QMean score : 0.545
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