Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVFFHKKIILNFIYSLMVAFLFHLSYGVLLKADGMAKKQTLLVGERLVWDKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRDANNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIVFTRKERTLLLSLQTSPYQDIVKATNDPLLANQLMNAYKKSVPFKRLVKNDKIAIVYTRDYRVGQAFGQPTIKMAMVSSRLHQYYLFSHSNGRYYDSKAQEVAGFLLETPVKYTRISSPFSYGRFHPVLKVKRPHYGVDYAAKHGSLIHSASDGRVGFIGVKAG---YGKVVEIHLNE----LRLVYAHMSAFANGLKKGSFVKKGQIIGRVGSTGLSTGPHLHF----GVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKAQYSKQKLEELFKTHSFEKNSFYLLEGF |
4QPB Chain:A ((33-138)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HYGVDFFMNIGTPVKAISSGKI----VEAGWSNYGGGNQIGLIENDGVHRQWYMHLSKYN--VKVGDYVKAGQIIGWSGSTGYSTAPHLHFQRMVNSFSNSTAQDPMPFLKS-------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QPB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -34754 for 659 contacts (-52.7/contact) +
2D Compatibility (PS) -9596 + (NN) 919 + (LL) 23704
1D Compatibility (HY) -6800 + (ID) 2150
Total energy: -28677.0 ( -43.52 by residue)
QMean score : 0.478
|
|
|