Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDFKVPPKAKGFKRLFKALFYSKDGLKCAWAEESAFRQIVILALFCIVLASYLTKDFLEWGLLILPCFLSVVIELINSSIEKAVDFTGTEFHPLAKKAKDMASSAQLIGLIFWAFIWGRYLLTLYFN
3ZE4 Chain:A ((16-121))
------------FTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVVIACWLDVDAITRVLLISSVMLVMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAVLIAIIVAVITWCILLWSHF--
General information:
TITO was launched using:
RESULT:
Template:
3ZE4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49656 for 617 contacts (-80.5/contact) +
2D Compatibility (PS) -11192 + (NN) -6867 + (LL) 240
1D Compatibility (HY) -10400 + (ID) 2250
Total energy: -80125.0 ( -129.86 by residue)
QMean score : 0.276
(partial model without unconserved sides chains):
PDB file :
Tito_3ZE4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZE4-query.scw
PDB file :
Tito_Scwrl_3ZE4.pdb
: