Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQYANAYQAYQHNRVSVESPAKLIEMLYEGILRFSSQAKRCIEN-EDIEKKIYY---INRVTDIFTELLNILDYEKGGKVAVYLTGLYTHQIKVLTQANVENDASKIDLVLNVARGLLEAWREIHSDELA
1ORJ Chain:A ((1003-1119))
----NIAEAYFQNMVETATPLEQIILLYDKAIECLERAIEIYDQVNELEKRKEFVENIDRVYDIISALKSFLDHEKGKEIAKNLDTIYT--IILNTLVKVDKTKEELQKILEILKDLREAWEE-------
General information:
TITO was launched using:
RESULT:
Template:
1ORJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56440 for 720 contacts (-78.4/contact) +
2D Compatibility (PS) -11846 + (NN) -3868 + (LL) 1296
1D Compatibility (HY) -7600 + (ID) 1800
Total energy: -80258.0 ( -111.47 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_1ORJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ORJ-query.scw
PDB file :
Tito_Scwrl_1ORJ.pdb
: