Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSPDVLLDSFKIALVKKDSKLAFSLIERLSLEQIKSLDLDALLSLKEMIAQSIELLEKEKEELQSQMHKAKQIQKFLS
1Z0J Chain:B ((44-52))
------------------------------------------------------------LRELKHTLA----------
General information:
TITO was launched using:
RESULT:
Template:
1Z0J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1226 for 26 contacts (47.2/contact) +
2D Compatibility (PS) -969 + (NN) -363 + (LL) 6772
1D Compatibility (HY) -800 + (ID) 100
Total energy: 5766.0 ( 221.77 by residue)
QMean score : 0.382
(partial model without unconserved sides chains):
PDB file :
Tito_1Z0J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z0J-query.scw
PDB file :
Tito_Scwrl_1Z0J.pdb
: