Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALLEIIHYPSKILRTISKEVVSFDSKLHQQLDDMHETMIASEGIGLAAIQVGLPLRMLIINLPQEDGVQHKEDCLEIINPKWIE-TKGSIMYREGCLSVPGFYEEVERFEKVKIEYQNR----FAEVKILEASELLAVAIQHEIDHLNGVLFVDKLSILKRKKFEKELKELQKKQKHK
1IX1 Chain:A ((2-169))
-AILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSED-----KSEPRVFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEV----AEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQQAHH
General information:
TITO was launched using:
RESULT:
Template:
1IX1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71119 for 1231 contacts (-57.8/contact) +
2D Compatibility (PS) -17731 + (NN) -4663 + (LL) 864
1D Compatibility (HY) -14400 + (ID) 4050
Total energy: -111099.0 ( -90.25 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_1IX1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IX1-query.scw
PDB file :
Tito_Scwrl_1IX1.pdb
: