Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKELRQKRPLVHNITNYVVAQFVANGLLALGVSPLMSDAIAEMPDLAKISDALAINIGTLN---ERTILCAKEAIKRYKALNKPIVLDPVGCSASALRYDTSLELLESKGISTLRGNAAELGSLVGISCESKG-LDSKHSATP--IEIVKRAAQKY-SVIAVMTGKTDYVSDGKKVLSITGGSEYLAAITGAGCLHAAACASFLSLKKDPLDSMVQLCAFYKQAAFSAQKKALENNGSNGSFLFYFLDALSLPIELENSLIKEEL |
3DZV Chain:A ((18-213)) | ---------PLIQCITNEITCESMANALLYIDAKPIMADDPREFPQMFQQTSALVLNLGHLSQEREQSLLAASDYARQ---VNKLTVVDLVGYGASDIRNEVGEKLVHNQP-TVVKGNLSEMRTFCQLVSH---PLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQDVLVSQEQVIVLQNGVPELDCFTGTGDLVGALVAALLGEGNAPMTAAVAAVSYFNLCGEKAKTKSQGLADFRQNTLNQLSLLMKEKDWFEAVKGRVL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87121 for 1475 contacts (-59.1/contact) +
2D Compatibility (PS) -19951 + (NN) -9100 + (LL) 1452
1D Compatibility (HY) -12400 + (ID) 2700
Total energy: -129820.0 ( -88.01 by residue)
QMean score : 0.389
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