Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIAVFGGGAWGRALAFAFGEK-NEVKI--ISRRDLNEPLKKLNDALISKGSAPIEQV----DLERGLKAA-LYVIAISVQHLREWFQNA-------SLPKNAKVLIASKGIEVLNKAFVSEIAKDFIDPNALCFLAGPSFAAEIIQGLPCALVIHSNNQALALEF----ANKTPSFIRAYAQQDIIGGEIAGAYKNVIAIAGGVCDGLKLGNSAKASLLSRGLVEMQRFGAFFGGKTETFLGLSGAGDLFLTANSILSRNYRVGLGLAQNKPLEVVLEELGEVAEGVKTTNAIVEIARKYGIYTPIASEL-ALLLKGKSVLESMNDLIRRA |
1M67 Chain:A ((20-343)) | ----VFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIASADINVARRLQRIMSTGDRSFV-CWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGKGLPIEEIQR---AVAEGVATADPLMRLAKQLKVKMPLCHQIYEIVYKKKNPRDALADLLSCG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1M67.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -209709 for 2641 contacts (-79.4/contact) +
2D Compatibility (PS) -32277 + (NN) -5748 + (LL) 868
1D Compatibility (HY) -24800 + (ID) 5300
Total energy: -276966.0 ( -104.87 by residue)
QMean score : 0.501
|
|
|