Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHLAPLIHIPFKALWLGTALSMFLSLNLNAEENPTKTEPKPAKGVKNKPKSPVTNVMMTNCDNLKDFNAKQKEVLKAAYQFGSKENLGYEMAGIAWKESCAGTYKINFSDPSAGIYHAYIPSVLKSYGHNNSPFLRNVMGELLIKDDAFASEVALKELLYWKTRYHDNLKDM---IKSYNKGSRWEKNEKANADAEKYYEEIQDRIRRLKESKIFDSQSSNDQELQKSANSNLDLDPIGNAMPQTLAQTETQKSQIEKSQIEEAQTQKSQEMKEAASEQAIKKPLEKEKDKPMYLAQINSADFAPAKKSPKKPAKASPKRSSKNNISVKSNTKTASKNKEVCKNCSPGQRNAILANHITLMQEL |
| 2PYB Chain:A ((1-94)) | --------------------------------------------------------------------------------------------------------------------------------------------------DDLDAIQLKLQELLASLHIFYSNLRGIHWNIKDTNFFVIHKKTQKLYEYIEKIIDIVAERSRMLG----YDSEFRYSEFMKKSFIKELDIESTSNFLPSMESIVCSLTEILKNIFGMRKLIDTAGDYGTANIMDDIMSDLEKHLWMHKALLENCD---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PYB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26414 for 542 contacts (48.7/contact) +
2D Compatibility (PS) -9839 + (NN) -5612 + (LL) 14176
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: 19789.0 ( 36.51 by residue)
QMean score : 0.228
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