Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEIKTLLVDFFPQAKHFGIILIKAIVVFCIGFYFSFFLRNKTMKLL-SKK-DEILANFVAQVTFILILIITTIIALSTLGVQTTSIITVLGTVGIAVALALKDYLSSIAGGIILIILHPFKKGDIIEISGLEGKVEALNFFNTSLRLHDGRLAVLPNRSVANSNIINSNNTACRRIEWVCGVGYGSDIELVHKTIKDVIDGMEKIDKNMPTFIGITDFGQSSLNFTIRVWAKIEDGIFNVRSELIERIKNALDANRIEIPFNKLDISINKQDSSK |
| 4AGF Chain:A ((26-281)) | ----------------SYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLCVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGD-LQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AGF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72274 for 1888 contacts (-38.3/contact) +
2D Compatibility (PS) -26739 + (NN) -8224 + (LL) 1312
1D Compatibility (HY) -29200 + (ID) 4200
Total energy: -139325.0 ( -73.80 by residue)
QMean score : 0.385
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