Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLINAVIEKDENGYFAFVPFL---------KGCVSQGKSYEEALRNIKEAIELYLGDLEADELAFLSKKNSVIAPIEIAFA
1X10 Chain:A ((164-207))
--------------FIHVPYIPEQIIDKIGKGQVPPSMSYEMALEAVKVAIEVALEELL----------------------
General information:
TITO was launched using:
RESULT:
Template:
1X10.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1753 for 139 contacts (-12.6/contact) +
2D Compatibility (PS) -3911 + (NN) -1257 + (LL) 3168
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -8203.0 ( -59.01 by residue)
QMean score : 0.153
(partial model without unconserved sides chains):
PDB file :
Tito_1X10.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X10-query.scw
PDB file :
Tito_Scwrl_1X10.pdb
: