Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIKMAKDYGFCFGVKRAIQIAEKNQNSL-IFGS-------LIHNAKEINRLEKNFNVKIEEDPKKIPKNKSVIIRTHGIPKQDLEYLKNKGVKITDATCPYVIKPQQIVESMSKEGYQIVLFGDINHPEVKGVISYATNQ---ALVVNSLEELQE--KKLQRKVALVSQTTKQTPKLLQIASYLVERCTEV--RIFNTICNATSYNQKAALDLSKEVDIMIVVGGKTSSNTKQLLSIAKQHCKDSYLVEDENELELAWFKDKKLCGITAGASTPDWIIENVKQKISTI |
3SZO Chain:A ((13-294)) | MQILLANPRGFCAGVDRAISIVE---NALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQ-ISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -85793 for 2218 contacts (-38.7/contact) +
2D Compatibility (PS) -28799 + (NN) -7698 + (LL) 28
1D Compatibility (HY) -16000 + (ID) 4300
Total energy: -142562.0 ( -64.28 by residue)
QMean score : 0.466
|
|
|