Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDKRIKTLLLFFGLNMVCLSVSFTNKPHLCFWFLVLGCYLVYEWQKKQKKDFQSAKSLKFD-SVSELEKDLNMEVTNDEWDTIKKLNEKLKMFFNVENAIYVFLLVSYLIVGMRVTLSLIDNHGVLK |
3WJM Chain:A ((24-86)) | -----------------------------TIKTKNVDAVFV--EKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLKMYRTGFMPKNLEFSVFYDKMRDEAIALFHLFYYAKD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WJM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10688 for 243 contacts (44.0/contact) +
2D Compatibility (PS) -6601 + (NN) -2299 + (LL) 2632
1D Compatibility (HY) -3200 + (ID) 900
Total energy: 320.0 ( 1.32 by residue)
QMean score : 0.240
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