Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNHTSSFGSFIAKNGFLNEKEVAQKFNDYIHDRDAQIWLMIMGYDLNKIEYVKANVLSGYKADVNVIIQIKMKQTLDSENLQVKLVSNLKGFNQIDKRKLRSYQEMWNIP------------------------------PNIYQLFAYFTGELKPTRQDIKYPNKRMLAYEFTNKEQQELLAWLNDNKMLIVS--DILKGRGEFSAEWVLVIQKINLNMKWALKNINEVMQHYLDDGIVEISKKGSLKIGRITIQRKGGDNGRESANMLQFKIDPTGLLG |
1TZ7 Chain:A ((292-414)) | ------------------------------------------------------------------------------------RVLHNLKLFDFLRLDHFRGFEAYWEVPYGEETAVNGRWVKAPGKTLFKKLLSYFPKNPFIAEDLGFITDEVRYLRETFKIPGSRVIEFAFYDKESEHLPHNVEENNVYYTSTHDLPPIRGWFENLGEESRKRLFEYLGREIKEEKVNEELIRLVLISRAKFAIIQMQDLLNLGNEARMNYPGRPFGNWRWRIKEDYTQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TZ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15698 for 553 contacts (28.4/contact) +
2D Compatibility (PS) -9054 + (NN) 5121 + (LL) 6260
1D Compatibility (HY) -8800 + (ID) 1250
Total energy: 7975.0 ( 14.42 by residue)
QMean score : 0.159
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