Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDLKVISKHYAKALKNHTKSDLALLEEIVVGLKNLAEAIKLHKLNQVLAHVSLKVKKEVVLEILEKITPTKACSILKPVMEVVLKNNRLDMLELVAEELSFDSKRTLEATLLVPQKLENNELEEVQQKLQARFNAPVEIAQDTW--SKKGVSLSV--SSLDLEIGFSK--EDILKKIEKQVIQSI |
| 2DM9 Chain:A ((137-192)) | -----------------------------------------------------------------------------------------------------------------------------RIEEIKSELG-DVSIELGETVDTMGGVIVETEDGRIRIDNTFEARMERFEGEIRSTI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DM9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1354 for 194 contacts (7.0/contact) +
2D Compatibility (PS) -5277 + (NN) -543 + (LL) 12808
1D Compatibility (HY) -2800 + (ID) 350
Total energy: 5192.0 ( 26.76 by residue)
QMean score : 0.349
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