Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKCEKRVFDSLPSTQTYLLEKLKSNKLKAPVLVLAKNQSAGIGSRGNIWEIVESALTFSLALNASDLPKDLPMQASALYLGFL-FKEVLKELGSQTWLKWPNDLYLGDQKIGGVMVNVYKGMRVCGIGVNRVSTKWACLDIGASDDWIIESFLKKIEENLFWGEVLSKYALEFHRSNSFNFHNDWGEAVSLKDAELLEDGRICIKGKIYDRM
2DZC Chain:A ((16-131))
--------FQEITSTNEFA----KTSYLEEGTVIVADKQTMG---------SPEGGLWLSIVLSPKVPQKDLP---KIVFLGAVGVVETLKEFSIDGRIKWPNDVLVNYKKIAGVLVEG--DKIVLGIGLNVNNKVPNGATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRVKILGSFEGIAEDIDDFGRLII
General information:
TITO was launched using:
RESULT:
Template:
2DZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51871 for 722 contacts (-71.8/contact) +
2D Compatibility (PS) -11286 + (NN) -8814 + (LL) 2316
1D Compatibility (HY) -8800 + (ID) 1850
Total energy: -80305.0 ( -111.23 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_2DZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DZC-query.scw
PDB file :
Tito_Scwrl_2DZC.pdb
: