Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQENQTIPFKCPKCQEPINVSEALYKQIESENQSRFLAQQKAFEKEVNEKRAQYQSYFKNLEQKEEALKERAKEQQAQFDEAVKQASALALQDERAKIIEEARKNAFLEQQKGLELLQKELDEKSKQVQELHQKEAEIERLKRENNEAESRLKAENEKKLNEKLELEREKIEKALHEKNELKFKQQEEQLEMLRNELKNAQRKAELSSQQFQGEVQELAIEEFLRQKFPLDSVEEIKKGQRGGDCIQVVHTREFQNCGKIYYESKRTKEFQKAWVEKLKSDMREIGADVGVIV---SEALPKEME-RMGL-FEGVWVCSFEEFKGLSAVLREGVIQVSLAKKSQENKGDKVNLLYHYLTSSEFSMQVNAIIEGFEQLRADLESEKRAMARIWKSREKQIEKVFESTINMYGSIKGIAGNAIGQVKALELGYDEGDLEN |
| 3E3K Chain:A ((349-411)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TDALSKSMAEIIQADMRQIGADVSLIGEEESSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLADKPLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYAPIATEIPFEQIKPV-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3E3K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 2001 for 253 contacts (7.9/contact) +
2D Compatibility (PS) -6548 + (NN) -2519 + (LL) 24936
1D Compatibility (HY) -3600 + (ID) 950
Total energy: 13320.0 ( 52.65 by residue)
QMean score : 0.289
|
|
|