Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDQLQIVPKAQVLKNNTMERSLALALQKVSIPRSTSAHRTLLINHFLEQVILQNIKT----IAFRGIIKLTPHNENP--------LLKPYSAFIT-LN--SIIRACAYCPL
3QZB Chain:A ((61-129))
-------------------------------------------TEHHIRWIKVFFQPDGDPYVYEVGRYEFNAHGESVQGPNIGAVYTEPTVTTVVKLNRSGTIIALSYCNI
General information:
TITO was launched using:
RESULT:
Template:
3QZB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23168 for 283 contacts (-81.9/contact) +
2D Compatibility (PS) -6119 + (NN) -2576 + (LL) 4060
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -29953.0 ( -105.84 by residue)
QMean score : 0.075
(partial model without unconserved sides chains):
PDB file :
Tito_3QZB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QZB-query.scw
PDB file :
Tito_Scwrl_3QZB.pdb
: