Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQEILDVLIVGAGPGGIATVVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRIDKDYKKQVVELKGHIPFKDSFKEETLENFTNLLKEHRITPSYKTDIESVKKEGELFKITTTSNTTYHAKFVVVAIGKMGQPNRPTTYKIP--VALSKQVVFSINDCK----ENEKTLVIGGGNSAVEYAIALCK-TTPTTLNYRKKEF--SRINEDNAKNLQEV--LDNNTLKSKLGVDIESLEEDNTQIKVNFTDNTSES---FDRLLYAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKSGASIATALNHGYDVAIEIAKRLQS |
| 2A87 Chain:A ((14-315)) | ----VRDVIVIGSGPAGYTAALYAARAQLAP-LVFEGT-SFGGALMTTTDV-----ENYPGFRNGITGP-ELMDEMREQALRFGADLRME---------DVESVSLHGPLKSVVTADGQTHRARAVILAMGAAAR-----YLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRASKIMLDRARNNDKIRFLTNHTV---VAVDGDTTV---TGLRVRDTNTGAETTLPVTGVFVAI-GHEPRSGLVREAIDVDPDGYV-LVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWLAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118819 for 2475 contacts (-48.0/contact) +
2D Compatibility (PS) -29680 + (NN) 3224 + (LL) 944
1D Compatibility (HY) -10800 + (ID) 4200
Total energy: -159331.0 ( -64.38 by residue)
QMean score : 0.374
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