Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVVGEIKLQIPAGKANPSPPVGPALGQRGVNIMEFCKAFNERTKDMGSFNIPVIITVYQDKSFTFITKKPPVTDLIKKASGVEKGSDNPLKNKIAKLTHKQVEEIAQLKMEDLNTSTMEAAKKIVMGSARSMGVEVVD
1OLN Chain:A ((7-139))
-------QIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKKAAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEVV-
General information:
TITO was launched using:
RESULT:
Template:
1OLN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54147 for 963 contacts (-56.2/contact) +
2D Compatibility (PS) -15106 + (NN) -13138 + (LL) 616
1D Compatibility (HY) -12800 + (ID) 4200
Total energy: -98775.0 ( -102.57 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_1OLN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OLN-query.scw
PDB file :
Tito_Scwrl_1OLN.pdb
: