Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDLSYSLERVLQEDPAARNKWEVLLLYPGIHALLCYRLAHALHKRRFYFIARALSQLARFITGIEIHPGAKIGRGLFIDHGMGVVIGETTEIGDDVTIYHGVTLGGTGKFKGKRHPTLGNRVVVGAGAKVLGAICVGDDVRIGANAVVLSDLPTGSTAVGAKAKTITKDR
4N6A Chain:A ((101-255))
------------ERDPACVSYSHCLLNYKGFLACQAHRVAHLLWRQSRRPLALALHSRIANVFAVDIHPAARIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIKIGEGAKVGAGSVVLIDVPPRTTAVGNPARLV----
General information:
TITO was launched using:
RESULT:
Template:
4N6A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129660 for 1237 contacts (-104.8/contact) +
2D Compatibility (PS) -16985 + (NN) -9506 + (LL) 1408
1D Compatibility (HY) -11600 + (ID) 3450
Total energy: -169793.0 ( -137.26 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_4N6A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4N6A-query.scw
PDB file :
Tito_Scwrl_4N6A.pdb
: