Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKQEYKQLPKRAEVHSATEQFKDTIKTSLGLDLFKGLGLTIKEFFSPSVTIHYPMEQLPLSPRYRAVHHLQRLLDSGSERCIGCGLCEKICTSNCIRIITHKGED-------------NRKKIDSYT----INLGRCIYCGLCAEVCP--ELAIVMGNRFENASTQRSQYGSKSEFLTSEQDAKNCSHAEFLGFGAVSPNYNERMQATPLDYVQEPSKEESKEESPTSPESHKGDENV |
| 2PDA Chain:A ((686-763)) | -------------------------------------------------------------------------------ENCIQCNQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGNCADICPPKEKALVMQPLDTQRDAQVPNLEYAARIPVKSEVLPRDSLKGSQFQEPLMEFSGACSGCGETPYVRVITQLFGERMFIANATGCSSIWGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PDA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42197 for 315 contacts (-134.0/contact) +
2D Compatibility (PS) -6232 + (NN) -1552 + (LL) 5512
1D Compatibility (HY) -5200 + (ID) 1200
Total energy: -50869.0 ( -161.49 by residue)
QMean score : 0.366
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